BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032C05SP1|AL429540
(893 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1498 1742 0.0
>3x_Contig1498
Length = 12634
Score = 1742 bits (879), Expect = 0.0
Identities = 893/895 (99%), Gaps = 2/895 (0%)
Strand = Plus / Minus
Query: 1 gatcgattatgataatgatgataattaaaaataaaaagaaagtatactattacattccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4233 gatcgattatgataatgatgataattaaaaataaaaagaaagtatactattacattccag 4174
Query: 61 atataatgtacatattaatgatagtattttaaagtctaatccttttccttccttgttgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4173 atataatgtacatattaatgatagtattttaaagtctaatccttttccttccttgttgcc 4114
Query: 121 ttacatttgaagtttttgcatcaattcactttcgtcttcctcccaatcaaacgatacgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4113 ttacatttgaagtttttgcatcaattcactttcgtcttcctcccaatcaaacgatacgtc 4054
Query: 181 tccttcaagtaatgcattaataaggtccttttgttcagctttgtgcttgttttcttccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4053 tccttcaagtaatgcattaataaggtccttttgttcagctttgtgcttgttttcttccaa 3994
Query: 241 cagcttcttttgctcttcgatttttttcttcaacgactgagctttcttctcttgattctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3993 cagcttcttttgctcttcgatttttttcttcaacgactgagctttcttctcttgattctt 3934
Query: 301 ccctttgccattatttcccttaattggttcgttggatttggtcgatttatctttgggtag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3933 ccctttgccattatttcccttaattggttcgttggatttggtcgatttatctttgggtag 3874
Query: 361 aggtttgtctgcctttttcaaaggcaatttcgactggctatgacctttactatgggagtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3873 aggtttgtctgcctttttcaaaggcaatttcgactggctatgacctttactatgggagtt 3814
Query: 421 tttgtttggatgtccttgttgtggtggatcacagctgatcccaagtgcttttgccaaagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3813 tttgtttggatgtccttgttgtggtggatcacagctgatcccaagtgcttttgccaaagg 3754
Query: 481 attatcagctaaggttttggatgaatgattggactttggcctttcgttatcaaatatggc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3753 attatcagctaaggttttggatgaatgattggactttggcctttcgttatcaaatatggc 3694
Query: 541 tgactttctcccactactaggtctcgaccagtcactatccgtactattatcgtctgtatc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3693 tgactttctcccactactaggtctcgaccagtcactatccgtactattatcgtctgtatc 3634
Query: 601 actatcagtgacagctaattgtgctgggttttgcttcttcgatgataacttctttttaga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3633 actatcagtgacagctaattgtgctgggttttgcttcttcgatgataacttctttttaga 3574
Query: 661 gtcggtgtgatgagttgatggttttttcgaagatcgtacctgtttcttgggagacgaggc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3573 gtcggtgtgatgagttgatggttttttcgaagatcgtacctgtttcttgggagacgaggc 3514
Query: 721 ttcttcagtgggctctgcggaag-ccatttagaatctaatggcattgtacgtttatgttg 779
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 3513 ttcttcagtgggctctgcggaagcccatttagaatctaatggcattgtacgtttatgttg 3454
Query: 780 aagtgtatgtaacggctgttggaggt-cacacaccctgtaattcctcgttagtaagcggt 838
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 3453 aagtgtatgtaacggctgttggaggtccacacaccctgtaattcctcgttagtaagcggt 3394
Query: 839 gttcggacgtgcataacatcttcacctttcaaattctcgttttatcatgaatgct 893
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3393 gttcggacgtgcataacatcttcacctttcaaattctcgttttatcatgaatgct 3339
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8188
Number of Sequences: 1807
Number of extensions: 8188
Number of successful extensions: 66
Number of sequences better than 1.0e-20: 1
length of query: 893
length of database: 10,358,551
effective HSP length: 16
effective length of query: 877
effective length of database: 10,329,639
effective search space: 9059093403
effective search space used: 9059093403
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)